Sara Ballouz
Sara Ballouz
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EGAD: ultra-fast functional analysis of gene networks
Summary: Evaluating gene networks with respect to known biology is a common task but often a computationally costly one. Many …
Sara Ballouz
,
Melanie Weber
,
Paul Pavlidis
,
Jesse Gillis
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DOI
Using predictive specificity to determine when gene set analysis is biologically meaningful
Gene set analysis, which translates gene lists into enriched functions, is among the most common bioinformatic methods. Yet few would …
Sara Ballouz
,
Paul Pavlidis
,
Jesse Gillis
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DOI
Exploiting single-cell expression to characterize co-expression replicability
BACKGROUND: Co-expression networks have been a useful tool for functional genomics, providing important clues about the cellular and …
Megan Crow
,
Anirban Paul
,
Sara Ballouz
,
Z. Josh Huang
,
Jesse Gillis
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DOI
Web tools for the prioritization of candidate disease genes
Despite increasing sequencing capacity, genetic disease investigation still frequently results in the identification of loci containing …
Martin Oti
,
Sara Ballouz
,
Merridee A. Wouters
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DOI
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